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pan genomic affymetrix genechip bovine genome array microarray platform  (Thermo Fisher)


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    Thermo Fisher pan genomic affymetrix genechip bovine genome array microarray platform
    Pan Genomic Affymetrix Genechip Bovine Genome Array Microarray Platform, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/bovine+microarray+platform/pmc04316787-239-14-15
    Average 86 stars, based on 1 article reviews
    pan genomic affymetrix genechip bovine genome array microarray platform - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Microarray:

    Article Title: ERAP1 and PDE8A Are Downregulated in Cattle Protected against Bovine Tuberculosis.
    Article Snippet: The RNA quality and quantity were verified by microelectrophoresis in a Bioanalyzer 2100 (Agilent Technologies, Santa Clara, CA, USA). .. Microarray Hybridisation The Affymetrix GeneChip Bovine Genome Array platform (Affymetrix, Santa Clara, CA, USA) was used in this study. .. The array contains 24,027 probe sets representing over 23,000 transcripts from Bos taurus and includes approximately 19,000 annotated UniGene clusters.

    Article Title: Comparing mRNA and sncRNA profiles during the maternal-to-embryonic transition in bovine IVF and scNT embryos†.
    Article Snippet: Production of embryos with high developmental competence by somatic cell nuclear transfer (scNT) is far less efficient than for in vitro fertilized (IVF) embryos, likely due to an accumulation of errors in genome reprogramming that results in aberrant expression of RNA transcripts, including messenger RNAs (mRNA) and, possibly, microRNAs (miRNA).. Thus, our objectives were to use RNAseq to determine the dynamics of mRNA expression in early developing scNT and IVF embryos in the context of the maternal-to-embryonic transition (MET) and to correlate apparent transcriptional dysregulation in cloned embryos with miRNA expression profiles.. Comparisons between scNT and IVF embryos indicated large scale transcriptome differences, which were most evident at the 8-cell and morula stages for genes associated with biological functions critical for the MET.

    Article Title: Analysis of the Bovine Monocyte-Derived Macrophage Response to Mycobacterium avium Subspecies Paratuberculosis Infection Using RNA-seq
    Article Snippet: .. Previously, the MDM-extracted RNA samples analyzed for the present study were examined with the pan-genomic Affymetrix ® GeneChip ® Bovine Genome Array microarray platform. ..

    Hybridization:

    Article Title: ERAP1 and PDE8A Are Downregulated in Cattle Protected against Bovine Tuberculosis.
    Article Snippet: The RNA quality and quantity were verified by microelectrophoresis in a Bioanalyzer 2100 (Agilent Technologies, Santa Clara, CA, USA). .. Microarray Hybridisation The Affymetrix GeneChip Bovine Genome Array platform (Affymetrix, Santa Clara, CA, USA) was used in this study. .. The array contains 24,027 probe sets representing over 23,000 transcripts from Bos taurus and includes approximately 19,000 annotated UniGene clusters.

    Transduction:

    Article Title: Comparing mRNA and sncRNA profiles during the maternal-to-embryonic transition in bovine IVF and scNT embryos†.
    Article Snippet: Production of embryos with high developmental competence by somatic cell nuclear transfer (scNT) is far less efficient than for in vitro fertilized (IVF) embryos, likely due to an accumulation of errors in genome reprogramming that results in aberrant expression of RNA transcripts, including messenger RNAs (mRNA) and, possibly, microRNAs (miRNA).. Thus, our objectives were to use RNAseq to determine the dynamics of mRNA expression in early developing scNT and IVF embryos in the context of the maternal-to-embryonic transition (MET) and to correlate apparent transcriptional dysregulation in cloned embryos with miRNA expression profiles.. Comparisons between scNT and IVF embryos indicated large scale transcriptome differences, which were most evident at the 8-cell and morula stages for genes associated with biological functions critical for the MET.

    other:

    Article Title: Prediction of potential molecular markers of bovine mastitis by meta-analysis of differentially expressed genes using combined p value and robust rank aggregation.
    Article Snippet: Bovine mastitis causes significant economic loss to the dairy industry by affecting milk quality and quantity.. Escherichia coli and Staphylococcus aureus are the two common mastitis-causing bacteria among the consortia of mastitis pathogens, wherein E. coli is an opportunistic environmental pathogen, and S. aureus is a contagious pathogen.. This study was designed to predict molecular markers of bovine mastitis by meta-analysis of differentially expressed genes (DEG) in E. coli– or S. aureus–infected mammary epithelial cells (MECs) using p value combination and robust rank aggregation (RRA) methods.



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    Thermo Fisher pan genomic affymetrix genechip bovine genome array microarray platform
    <t>Microarray</t> analysis and validation of KDM4D mRNA expression in bMECs stimulated with Mycoplasma bovis ; bovine mammary epithelial cells (bMECs) were incubated with live M. bovis at an multiplicity of infection of 1,000 for 6 h. The data are expressed from three (microarray) or four (real-time polymerase chain reaction [PCR]) independent experiments. Significant difference ( * p <0.05) compared with unstimulated bMECs.
    Pan Genomic Affymetrix Genechip Bovine Genome Array Microarray Platform, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    <t>Microarray</t> analysis and validation of KDM4D mRNA expression in bMECs stimulated with Mycoplasma bovis ; bovine mammary epithelial cells (bMECs) were incubated with live M. bovis at an multiplicity of infection of 1,000 for 6 h. The data are expressed from three (microarray) or four (real-time polymerase chain reaction [PCR]) independent experiments. Significant difference ( * p <0.05) compared with unstimulated bMECs.
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    Microarray analysis and validation of KDM4D mRNA expression in bMECs stimulated with Mycoplasma bovis ; bovine mammary epithelial cells (bMECs) were incubated with live M. bovis at an multiplicity of infection of 1,000 for 6 h. The data are expressed from three (microarray) or four (real-time polymerase chain reaction [PCR]) independent experiments. Significant difference ( * p <0.05) compared with unstimulated bMECs.

    Journal: Journal of Veterinary Science

    Article Title: Innate immune response of bovine mammary epithelial cells to Mycoplasma bovis

    doi: 10.4142/jvs.2018.19.1.79

    Figure Lengend Snippet: Microarray analysis and validation of KDM4D mRNA expression in bMECs stimulated with Mycoplasma bovis ; bovine mammary epithelial cells (bMECs) were incubated with live M. bovis at an multiplicity of infection of 1,000 for 6 h. The data are expressed from three (microarray) or four (real-time polymerase chain reaction [PCR]) independent experiments. Significant difference ( * p <0.05) compared with unstimulated bMECs.

    Article Snippet: The gene expression dataset was obtained via Agilent single-color microarray platform (4 × 44K bovine gene expression array, grid ID 023647).

    Techniques: Microarray, Expressing, Incubation, Infection, Real-time Polymerase Chain Reaction